STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL5A1Collagen alpha-1 chain. (379 aa)    
Predicted Functional Partners:
COL11A1
Collagen alpha-1 chain.
 
      0.899
ENSCDRP00005032763
annotation not available
 
      0.899
COL5A2
Collagen alpha-2 chain.
 
 
 0.830
COL1A2
Collagen alpha-2(I) chain.
 
 
 0.781
COL3A1
Collagen alpha-1 chain.
 
 
 
 0.747
COL23A1
Collagen alpha-1(XXIII) chain.
 
  
 0.661
COL13A1
Collagen alpha-1 chain.
 
  
 0.557
COL2A1
Collagen alpha-1 chain.
 
 
 0.511
COL25A1
Collagen alpha-1 chain.
 
  
 0.509
COL9A2
Collagen alpha-2 chain.
 
 
 0.480
Your Current Organism:
Camelus dromedarius
NCBI taxonomy Id: 9838
Other names: Arabian camel, C. dromedarius, camel, dromedaries, dromedary, dromedary camel, one-humped camel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.