Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DCS_00743 | DCS_01295 | A0A151GRD6 | A0A151GSW2 | Ku70 protein. | ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. | 0.999 |
DCS_00743 | DCS_05410 | A0A151GRD6 | A0A151GMS4 | Ku70 protein. | Flap structure-specific endonuclease. | 0.594 |
DCS_00743 | DCS_05700 | A0A151GRD6 | A0A151GNJ9 | Ku70 protein. | DNA polymerase. | 0.423 |
DCS_00743 | DCS_06713 | A0A151GRD6 | A0A151GCG7 | Ku70 protein. | DNA ligase. | 0.883 |
DCS_00743 | DCS_06808 | A0A151GRD6 | A0A151GCK3 | Ku70 protein. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.471 |
DCS_00743 | DCS_07385 | A0A151GRD6 | A0A151GEC9 | Ku70 protein. | Activator 1 41 kDa subunit. | 0.476 |
DCS_00743 | DCS_07535 | A0A151GRD6 | A0A151GES9 | Ku70 protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.441 |
DCS_00743 | DCS_07536 | A0A151GRD6 | A0A151GER9 | Ku70 protein. | Vezatin domain-containing protein. | 0.441 |
DCS_00743 | DCS_07801 | A0A151GRD6 | A0A151GFG3 | Ku70 protein. | DNA ligase. | 0.883 |
DCS_00743 | FEN1 | A0A151GRD6 | A0A151GJC4 | Ku70 protein. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.691 |
DCS_01295 | DCS_00743 | A0A151GSW2 | A0A151GRD6 | ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. | Ku70 protein. | 0.999 |
DCS_01295 | DCS_05410 | A0A151GSW2 | A0A151GMS4 | ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. | Flap structure-specific endonuclease. | 0.541 |
DCS_01295 | DCS_06713 | A0A151GSW2 | A0A151GCG7 | ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. | DNA ligase. | 0.910 |
DCS_01295 | DCS_07385 | A0A151GSW2 | A0A151GEC9 | ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. | Activator 1 41 kDa subunit. | 0.489 |
DCS_01295 | DCS_07535 | A0A151GSW2 | A0A151GES9 | ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.461 |
DCS_01295 | DCS_07536 | A0A151GSW2 | A0A151GER9 | ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. | Vezatin domain-containing protein. | 0.461 |
DCS_01295 | DCS_07801 | A0A151GSW2 | A0A151GFG3 | ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. | DNA ligase. | 0.910 |
DCS_01295 | FEN1 | A0A151GSW2 | A0A151GJC4 | ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.640 |
DCS_05410 | DCS_00743 | A0A151GMS4 | A0A151GRD6 | Flap structure-specific endonuclease. | Ku70 protein. | 0.594 |
DCS_05410 | DCS_01295 | A0A151GMS4 | A0A151GSW2 | Flap structure-specific endonuclease. | ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. | 0.541 |
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