Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DCS_00269 | DCS_00322 | A0A151GPV4 | A0A151GQC1 | Sas10/Utp3/C1D-like protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.997 |
DCS_00269 | DCS_00361 | A0A151GPV4 | A0A151GQ95 | Sas10/Utp3/C1D-like protein. | rRNA processing protein Bystin. | 0.991 |
DCS_00269 | DCS_00517 | A0A151GPV4 | A0A151GQJ8 | Sas10/Utp3/C1D-like protein. | WD repeat containing protein 36. | 0.989 |
DCS_00269 | DCS_00577 | A0A151GPV4 | A0A151GQR1 | Sas10/Utp3/C1D-like protein. | Ribosome biogenesis protein. | 0.996 |
DCS_00269 | DCS_01836 | A0A151GPV4 | A0A151GUE5 | Sas10/Utp3/C1D-like protein. | U3 small nucleolar RNA-associated protein 22. | 0.956 |
DCS_00269 | DCS_03797 | A0A151GPV4 | A0A151GIC0 | Sas10/Utp3/C1D-like protein. | Periodic tryptophan protein 2. | 0.996 |
DCS_00269 | DCS_03873 | A0A151GPV4 | A0A151GIE8 | Sas10/Utp3/C1D-like protein. | Ribosome biogenesis protein Noc4. | 0.998 |
DCS_00269 | DCS_06880 | A0A151GPV4 | A0A151GCU6 | Sas10/Utp3/C1D-like protein. | WD repeat protein. | 0.997 |
DCS_00269 | DCS_07157 | A0A151GPV4 | A0A151GDN4 | Sas10/Utp3/C1D-like protein. | Protein BFR2. | 0.997 |
DCS_00269 | NAT10 | A0A151GPV4 | A0A151GBY0 | Sas10/Utp3/C1D-like protein. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.984 |
DCS_00322 | DCS_00269 | A0A151GQC1 | A0A151GPV4 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Sas10/Utp3/C1D-like protein. | 0.997 |
DCS_00322 | DCS_00361 | A0A151GQC1 | A0A151GQ95 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | rRNA processing protein Bystin. | 0.998 |
DCS_00322 | DCS_00517 | A0A151GQC1 | A0A151GQJ8 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | WD repeat containing protein 36. | 0.997 |
DCS_00322 | DCS_00577 | A0A151GQC1 | A0A151GQR1 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Ribosome biogenesis protein. | 0.998 |
DCS_00322 | DCS_01836 | A0A151GQC1 | A0A151GUE5 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | U3 small nucleolar RNA-associated protein 22. | 0.996 |
DCS_00322 | DCS_03797 | A0A151GQC1 | A0A151GIC0 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Periodic tryptophan protein 2. | 0.993 |
DCS_00322 | DCS_03873 | A0A151GQC1 | A0A151GIE8 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Ribosome biogenesis protein Noc4. | 0.998 |
DCS_00322 | DCS_06880 | A0A151GQC1 | A0A151GCU6 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | WD repeat protein. | 0.997 |
DCS_00322 | DCS_07157 | A0A151GQC1 | A0A151GDN4 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Protein BFR2. | 0.992 |
DCS_00322 | NAT10 | A0A151GQC1 | A0A151GBY0 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.993 |
page 1 of 6