Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DCS_06956UBI4-Ubiquitin. (229 aa)    
Predicted Functional Partners:
DCS_00818
Eukaryotic translation initiation factor 5A.
   
 0.988
DCS_01783
HECT-domain-containing protein.
   
 0.981
DCS_02348
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.976
DCS_07870
Ribosomal protein S28; Belongs to the universal ribosomal protein uS12 family.
   
 0.966
DCS_06031
Ubiquitin.
   
  0.965
DCS_02264
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.964
DCS_00885
Ribosomal protein L21e.
   
 0.959
DCS_01382
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.958
DCS_04860
60S ribosomal protein L2.
   
 0.957
DCS_04177
Ribosomal protein L13, eukaryotic/archaeal; Belongs to the universal ribosomal protein uL13 family.
   
 0.956
Your Current Organism:
Drechmeria coniospora
NCBI taxonomy Id: 98403
Other names: CBS 615.82, D. coniospora, Meria coniospora
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