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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCS_04348Carotenoid cleavage dioxygenase 1. (574 aa)    
Predicted Functional Partners:
DCS_01514
Aldehyde dehydrogenase 3B1.
     
 0.931
DCS_06954
Glycerol-3-phosphate O-acyltransferase.
    
 0.609
DCS_04582
Squalene synthase.
     
 0.605
DCS_08090
Xanthine dehydrogenase.
     
 0.578
DCS_06557
Ras GTPase activating protein.
   
 
  0.560
DCS_00312
RhoGAP domain-containing protein.
     
 0.539
DCS_07907
Plasma membrane SNARE protein.
   
 
  0.536
DCS_03612
Putative ribosomal protein MRP17, mitochondrial.
     
 0.527
DCS_00947
Uncharacterized protein.
  
  
 
0.526
DCS_00223
HTH APSES-type domain-containing protein.
   
 
 0.513
Your Current Organism:
Drechmeria coniospora
NCBI taxonomy Id: 98403
Other names: CBS 615.82, D. coniospora, Meria coniospora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.