Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
DCS_04348Carotenoid cleavage dioxygenase 1. (574 aa)    
Predicted Functional Partners:
DCS_01514
Aldehyde dehydrogenase 3B1.
    
 0.951
DCS_00947
Uncharacterized protein.
     
  0.794
DCS_04582
Squalene synthase.
     
 0.732
DCS_00223
HTH APSES-type domain-containing protein.
   
 
 0.682
DCS_08090
Xanthine dehydrogenase.
     
 0.657
DCS_04865
SKP1 component; Belongs to the SKP1 family.
    
  0.630
DCS_04998
Uncharacterized protein.
    
  0.630
DCS_06579
Uncharacterized protein.
     
 0.626
DCS_01463
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
     
 0.614
DCS_02148
Uncharacterized protein.
     
  0.607
Your Current Organism:
Drechmeria coniospora
NCBI taxonomy Id: 98403
Other names: CBS 615.82, D. coniospora, Meria coniospora
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