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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCS_04790NOL1/NOP2/sun domain protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (545 aa)    
Predicted Functional Partners:
DCS_04549
Ribosome assembly protein Noc2.
   
 
 0.891
DCS_04824
60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
  
 
 0.883
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.882
DCS_06256
Eukaryotic rRNA processing.
   
 
 0.873
DCS_05427
RRM domain-containing protein.
   
 
 0.859
DCS_00555
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.851
DCS_02949
Formyl_trans_N domain-containing protein.
  
  
 0.850
DCS_07790
Brix domain containing protein.
   
 
 0.848
DCS_06186
Brix domain-containing protein 2.
   
 
 0.847
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.835
Your Current Organism:
Drechmeria coniospora
NCBI taxonomy Id: 98403
Other names: CBS 615.82, D. coniospora, Meria coniospora
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