STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCS_00732Uncharacterized protein. (238 aa)    
Predicted Functional Partners:
SLX1
Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA.
   
 0.998
DCS_03166
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.997
DCS_03857
U2 snRNP component prp10.
   
 0.996
DCS_04480
Small nuclear ribonucleoprotein G.
   
 0.996
DCS_05617
RRM domain-containing protein.
   
 0.996
DCS_01235
Pre-mRNA-splicing factor rse-1.
    
 0.996
DCS_02668
Small nuclear ribonucleoprotein Sm D2.
   
 0.996
DCS_06181
Splicing factor 3b.
   
 0.995
DCS_07407
Splicing factor 3a subunit 2.
    
 0.995
DCS_07510
Small nuclear ribonucleoprotein.
   
 0.995
Your Current Organism:
Drechmeria coniospora
NCBI taxonomy Id: 98403
Other names: CBS 615.82, D. coniospora, Meria coniospora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.