Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DCS_01141 | DCS_02355 | A0A151GSC0 | A0A151GVT4 | PHF5-like protein. | RAM signaling pathway, SOG2. | 0.721 |
DCS_01141 | DCS_02668 | A0A151GSC0 | A0A151GWP2 | PHF5-like protein. | Small nuclear ribonucleoprotein Sm D2. | 0.980 |
DCS_01141 | DCS_03166 | A0A151GSC0 | A0A151GY61 | PHF5-like protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.993 |
DCS_01141 | DCS_03712 | A0A151GSC0 | A0A151GI11 | PHF5-like protein. | Small nuclear ribonucleoprotein. | 0.966 |
DCS_01141 | DCS_03822 | A0A151GSC0 | A0A151GI91 | PHF5-like protein. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.974 |
DCS_01141 | DCS_04480 | A0A151GSC0 | A0A151GK42 | PHF5-like protein. | Small nuclear ribonucleoprotein G. | 0.994 |
DCS_01141 | DCS_05617 | A0A151GSC0 | A0A151GND1 | PHF5-like protein. | RRM domain-containing protein. | 0.966 |
DCS_02355 | DCS_01141 | A0A151GVT4 | A0A151GSC0 | RAM signaling pathway, SOG2. | PHF5-like protein. | 0.721 |
DCS_02355 | DCS_02668 | A0A151GVT4 | A0A151GWP2 | RAM signaling pathway, SOG2. | Small nuclear ribonucleoprotein Sm D2. | 0.791 |
DCS_02355 | DCS_03166 | A0A151GVT4 | A0A151GY61 | RAM signaling pathway, SOG2. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.788 |
DCS_02355 | DCS_03712 | A0A151GVT4 | A0A151GI11 | RAM signaling pathway, SOG2. | Small nuclear ribonucleoprotein. | 0.736 |
DCS_02355 | DCS_03822 | A0A151GVT4 | A0A151GI91 | RAM signaling pathway, SOG2. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.781 |
DCS_02355 | DCS_04480 | A0A151GVT4 | A0A151GK42 | RAM signaling pathway, SOG2. | Small nuclear ribonucleoprotein G. | 0.779 |
DCS_02355 | DCS_05158 | A0A151GVT4 | A0A151GM05 | RAM signaling pathway, SOG2. | Uncharacterized protein. | 0.829 |
DCS_02355 | DCS_05617 | A0A151GVT4 | A0A151GND1 | RAM signaling pathway, SOG2. | RRM domain-containing protein. | 0.736 |
DCS_02355 | DCS_05758 | A0A151GVT4 | A0A151GNX3 | RAM signaling pathway, SOG2. | Mst3-like protein kinase. | 0.908 |
DCS_02355 | DCS_08034 | A0A151GVT4 | A0A151GG48 | RAM signaling pathway, SOG2. | Protein kinase domain-containing protein. | 0.908 |
DCS_02668 | DCS_01141 | A0A151GWP2 | A0A151GSC0 | Small nuclear ribonucleoprotein Sm D2. | PHF5-like protein. | 0.980 |
DCS_02668 | DCS_02355 | A0A151GWP2 | A0A151GVT4 | Small nuclear ribonucleoprotein Sm D2. | RAM signaling pathway, SOG2. | 0.791 |
DCS_02668 | DCS_03166 | A0A151GWP2 | A0A151GY61 | Small nuclear ribonucleoprotein Sm D2. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
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