Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SGRA_0632 | SGRA_0633 | SGRA_0632 | SGRA_0633 | COG0463 Glycosyltransferases involved in cell wall biogenesis. | Hypothetical protein. | 0.737 |
| SGRA_0632 | SGRA_0634 | SGRA_0632 | SGRA_0634 | COG0463 Glycosyltransferases involved in cell wall biogenesis. | 50S ribosomal protein L31 type B. | 0.726 |
| SGRA_0632 | SGRA_1477 | SGRA_0632 | SGRA_1477 | COG0463 Glycosyltransferases involved in cell wall biogenesis. | Dolichyl-phosphate-mannose-protein mannosyltransferase family protein; COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family. | 0.601 |
| SGRA_0632 | obgE | SGRA_0632 | SGRA_0635 | COG0463 Glycosyltransferases involved in cell wall biogenesis. | GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.656 |
| SGRA_0632 | wcaJ | SGRA_0632 | SGRA_2551 | COG0463 Glycosyltransferases involved in cell wall biogenesis. | COG2148 Sugar transferases involved in lipopolysaccharide synthesis. | 0.474 |
| SGRA_0633 | SGRA_0632 | SGRA_0633 | SGRA_0632 | Hypothetical protein. | COG0463 Glycosyltransferases involved in cell wall biogenesis. | 0.737 |
| SGRA_0633 | SGRA_0634 | SGRA_0633 | SGRA_0634 | Hypothetical protein. | 50S ribosomal protein L31 type B. | 0.762 |
| SGRA_0633 | obgE | SGRA_0633 | SGRA_0635 | Hypothetical protein. | GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.687 |
| SGRA_0634 | SGRA_0632 | SGRA_0634 | SGRA_0632 | 50S ribosomal protein L31 type B. | COG0463 Glycosyltransferases involved in cell wall biogenesis. | 0.726 |
| SGRA_0634 | SGRA_0633 | SGRA_0634 | SGRA_0633 | 50S ribosomal protein L31 type B. | Hypothetical protein. | 0.762 |
| SGRA_0634 | obgE | SGRA_0634 | SGRA_0635 | 50S ribosomal protein L31 type B. | GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.697 |
| SGRA_1477 | SGRA_0632 | SGRA_1477 | SGRA_0632 | Dolichyl-phosphate-mannose-protein mannosyltransferase family protein; COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family. | COG0463 Glycosyltransferases involved in cell wall biogenesis. | 0.601 |
| obgE | SGRA_0632 | SGRA_0635 | SGRA_0632 | GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | COG0463 Glycosyltransferases involved in cell wall biogenesis. | 0.656 |
| obgE | SGRA_0633 | SGRA_0635 | SGRA_0633 | GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | Hypothetical protein. | 0.687 |
| obgE | SGRA_0634 | SGRA_0635 | SGRA_0634 | GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 50S ribosomal protein L31 type B. | 0.697 |
| wcaJ | SGRA_0632 | SGRA_2551 | SGRA_0632 | COG2148 Sugar transferases involved in lipopolysaccharide synthesis. | COG0463 Glycosyltransferases involved in cell wall biogenesis. | 0.474 |