STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGRA_1315Phage tail protein. (152 aa)    
Predicted Functional Partners:
SGRA_1317
Cytoplasmic fibril protein; COG3497 Phage tail sheath protein FI.
 
 
 0.929
SGRA_1312
Rhs element Vgr protein; COG3500 Phage protein D.
 
 
   0.926
SGRA_1319
Hypothetical protein.
 
 
 
 0.913
SGRA_1308
Hypothetical protein.
 
 
 
 0.910
SGRA_1346
Hypothetical protein.
 
 
 
 0.904
SGRA_1309
GPW/gp25; COG3628 Phage baseplate assembly protein W.
 
   0.902
SGRA_2322
COG1652 Uncharacterized protein containing LysM domain.
 
   0.881
SGRA_2579
COG1652 Uncharacterized protein containing LysM domain.
 
   0.881
SGRA_1311
Membrane protein.
 
     0.816
SGRA_2172
Hypothetical protein.
 
     0.785
Your Current Organism:
Saprospira grandis
NCBI taxonomy Id: 984262
Other names: S. grandis str. Lewin, Saprospira grandis str. Lewin, Saprospira grandis strain Lewin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.