rpsT protein (Saprospira grandis) - STRING interaction network

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second shell of interactors

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Predicted Interactions

gene neighborhood

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textmining

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Score

rpsT

30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (83 aa)

Predicted Functional Partners:

rplM

0.993

rpmB

0.993

rplU

0.993

rpmF

0.993

rpmE

0.992

rpsO

0.992

rpsP

0.992

rpmA

0.991

rpmH

0.990

rpsI

0.989

Your Current Organism:

Saprospira grandis

NCBI taxonomy Id: 984262
Other names: S. grandis str. Lewin, Saprospira grandis str. Lewin, Saprospira grandis strain Lewin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplU	SGRA_1599	SGRA_2700	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.994
rplM	rpmA	SGRA_1599	SGRA_2701	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.994
rplM	rpmB	SGRA_1599	SGRA_2401	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.992
rplM	rpmE	SGRA_1599	SGRA_0499	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0254 Ribosomal protein L31.	0.990
rplM	rpmF	SGRA_1599	SGRA_2714	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.992
rplM	rpmH	SGRA_1599	SGRA_1659	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.985
rplM	rpsI	SGRA_1599	SGRA_1598	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsO	SGRA_1599	SGRA_2530	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.995
rplM	rpsP	SGRA_1599	SGRA_3490	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.993
rplM	rpsT	SGRA_1599	SGRA_1570	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.993
rplU	rplM	SGRA_2700	SGRA_1599	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.994
rplU	rpmA	SGRA_2700	SGRA_2701	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.998
rplU	rpmB	SGRA_2700	SGRA_2401	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.993
rplU	rpmE	SGRA_2700	SGRA_0499	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG0254 Ribosomal protein L31.	0.992
rplU	rpmF	SGRA_2700	SGRA_2714	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.993
rplU	rpmH	SGRA_2700	SGRA_1659	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.991
rplU	rpsI	SGRA_2700	SGRA_1598	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.993
rplU	rpsO	SGRA_2700	SGRA_2530	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.988
rplU	rpsP	SGRA_2700	SGRA_3490	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.993
rplU	rpsT	SGRA_2700	SGRA_1570	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.993