STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGRA_2369Hypothetical protein. (248 aa)    
Predicted Functional Partners:
SGRA_2368
COG4886 Leucine-rich repeat (LRR) protein.
       0.762
SGRA_2370
COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
       0.636
SGRA_2371
Phosphoesterase PA-phosphatase related protein; COG0671 Membrane-associated phospholipid phosphatase.
  
   0.609
SGRA_2372
Permease YjgP/YjgQ family protein; COG0795 Predicted permeases.
       0.576
SGRA_1459
COG0785 Cytochrome c biogenesis protein.
   
    0.459
SGRA_1077
Hypothetical protein; COG1090 Predicted nucleoside-diphosphate sugar epimerase.
  
    0.403
Your Current Organism:
Saprospira grandis
NCBI taxonomy Id: 984262
Other names: S. grandis str. Lewin, Saprospira grandis str. Lewin, Saprospira grandis strain Lewin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.