STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGRA_3022Morn variant repeat-containing protein; COG2849 Uncharacterized protein conserved in bacteria. (324 aa)    
Predicted Functional Partners:
SGRA_3023
VWA containing CoxE family protein.
       0.773
SGRA_2864
Morn variant repeat-containing protein; COG2849 Uncharacterized protein conserved in bacteria.
  
     0.766
SGRA_1298
COG2849 Uncharacterized protein conserved in bacteria.
  
     0.758
SGRA_3231
COG2849 Uncharacterized protein conserved in bacteria.
  
     0.736
SGRA_0688
COG2849 Uncharacterized protein conserved in bacteria.
  
     0.689
SGRA_2790
Hypothetical protein.
  
     0.551
SGRA_0524
Hypothetical protein.
  
     0.482
SGRA_3015
Membrane protein.
 
     0.476
SGRA_1645
Endonuclease i.
  
     0.472
SGRA_0721
Hypothetical protein.
  
     0.451
Your Current Organism:
Saprospira grandis
NCBI taxonomy Id: 984262
Other names: S. grandis str. Lewin, Saprospira grandis str. Lewin, Saprospira grandis strain Lewin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.