STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGRA_4040Hypothetical protein. (208 aa)    
Predicted Functional Partners:
ggt
COG0405 Gamma-glutamyltransferase.
     
  0.900
gshB
COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase).
     
  0.900
SGRA_3935
Peroxiredoxin; COG0386 Glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
  0.900
ggt-2
Gamma-glutamyltranspeptidase small chain; COG0405 Gamma-glutamyltransferase.
     
  0.900
SGRA_4038
Hypothetical protein.
       0.773
SGRA_4039
Hypothetical protein.
       0.773
SGRA_4041
Hypothetical protein.
       0.773
smc
Chromosome segregation protein smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
       0.661
Your Current Organism:
Saprospira grandis
NCBI taxonomy Id: 984262
Other names: S. grandis str. Lewin, Saprospira grandis str. Lewin, Saprospira grandis strain Lewin
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.