STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1E4RKA8RNA12 domain-containing protein. (863 aa)    
Predicted Functional Partners:
A0A1E4RI11
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.743
A0A1E4RCF1
ATP-dependent metallopeptidase Hfl; Belongs to the AAA ATPase family.
    
 
 0.703
A0A1E4RNC4
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.639
A0A1E4RFX8
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
  0.589
A0A1E4RMP1
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.589
A0A1E4RNB2
RNA polymerase II subunit.
    
  0.589
A0A1E4RC04
RPOLD domain-containing protein.
    
  0.579
A0A1E4RR31
RBP11-like subunits of RNA polymerase.
    
  0.570
A0A1E4RN31
Uncharacterized protein.
    
  0.568
A0A1E4RDP5
DRMBL domain-containing protein.
    
 0.557
Your Current Organism:
Hyphopichia burtonii
NCBI taxonomy Id: 984485
Other names: H. burtonii NRRL Y-1933, Hyphopichia burtonii NRRL Y-1933
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.