STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX24995.1Ubiquinol-cytochrome c reductase cytochrome c1 subunit. (262 aa)    
Predicted Functional Partners:
SDW73554.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
   
 
 0.999
SDX24936.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 0.999
SDX24966.1
Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 0.999
SDX50142.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit.
 
 0.999
SDX49461.1
Cytochrome c.
 
 0.998
SDX88436.1
Arsenite oxidase small subunit.
  
 0.998
SDW14020.1
Predicted Zn-dependent peptidase; Belongs to the peptidase M16 family.
   
 0.997
SDX31334.1
Zinc protease; Belongs to the peptidase M16 family.
   
 0.997
SDX31367.1
Zinc protease.
   
 0.997
SDX28427.1
Cytochrome c.
 
 0.996
Your Current Organism:
Ruegeria halocynthiae
NCBI taxonomy Id: 985054
Other names: CCUG 60744, DSM 27839, KCTC 23463, R. halocynthiae, Ruegeria halocynthiae Kim et al. 2012, Ruegeria sp. MA1-6, strain MA1-6
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