STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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[Homology]
Score
dapA4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (290 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
 
 
 0.994
asd
Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
 
 0.984
SDX78393.1
4-hydroxy-tetrahydrodipicolinate synthase.
  
  
 
0.904
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
  
 0.853
SDW14757.1
Aspartate kinase; Belongs to the aspartokinase family.
 
 
 0.843
SDX18543.1
Homoserine dehydrogenase.
 
 
 0.834
SDW22912.1
Homoserine dehydrogenase.
 
 
 0.825
SDW32350.1
4-hydroxy-tetrahydrodipicolinate synthase.
  
  
0.782
SDW94441.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
  
  
0.744
SDX04826.1
Diaminopimelate decarboxylase.
 
  
 0.742
Your Current Organism:
Ruegeria halocynthiae
NCBI taxonomy Id: 985054
Other names: CCUG 60744, DSM 27839, KCTC 23463, R. halocynthiae, Ruegeria halocynthiae Kim et al. 2012, Ruegeria sp. MA1-6, strain MA1-6
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