STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AET58945.1Transcriptional regulatory protein resD; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (226 aa)    
Predicted Functional Partners:
AET58946.1
Sensor protein; COG0642 Signal transduction histidine kinase.
 
 0.977
AET60256.1
Response regulator receiver:ATP-binding region, ATPase-like:histidine kinase, hamp region:histidine; COG0642 Signal transduction histidine kinase.
 
 
 0.864
AET58563.1
COG0642 Signal transduction histidine kinase.
 
 
 0.841
AET62126.1
ATPase, histidine kinase-, DNA gyrase b-, and hsp90-like domain protein; COG0642 Signal transduction histidine kinase.
 
   0.833
AET59892.1
COG0642 Signal transduction histidine kinase.
 
 
 0.831
AET57962.1
COG0642 Signal transduction histidine kinase.
 
 0.827
AET57254.1
COG0642 Signal transduction histidine kinase.
 
 0.820
AET59939.1
Two-component sensor histidine kinase PhoR; COG0642 Signal transduction histidine kinase.
 
 0.820
AET61286.1
COG0642 Signal transduction histidine kinase.
 
 0.810
AET58631.1
COG0642 Signal transduction histidine kinase.
 
 0.809
Your Current Organism:
Paenibacillus terrae
NCBI taxonomy Id: 985665
Other names: P. terrae HPL-003, Paenibacillus sp. HPL-003, Paenibacillus terrae HPL-003, Paenibacillus terrae str. HPL-003, Paenibacillus terrae strain HPL-003
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