STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LEMA_P050140.1WD_REPEATS_REGION domain-containing protein. (726 aa)    
Predicted Functional Partners:
LEMA_P020050.1
Uncharacterized protein.
    
 0.999
LEMA_P007880.1
Uncharacterized protein.
   
 0.999
LEMA_P061910.1
Similar to nuclear matrix protein.
    
 0.998
LEMA_P077430.1
Uncharacterized protein.
    
 0.998
LEMA_P052050.1
RRM domain-containing protein.
   
 0.956
LEMA_P038440.1
Similar to ATP-dependent RNA helicase sub2.
    
 0.938
LEMA_P024510.1
Uncharacterized protein.
    
 0.938
LEMA_P064660.1
G-patch domain-containing protein.
    
 0.914
LEMA_P028560.1
Similar to integral membrane protein.
    
 0.914
LEMA_P032240.1
Uncharacterized protein.
    
 0.914
Your Current Organism:
Leptosphaeria maculans
NCBI taxonomy Id: 985895
Other names: L. maculans JN3, Leptosphaeria maculans JN3, Leptosphaeria maculans v23.1.3
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