STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515395_01518Unannotated protein. (295 aa)    
Predicted Functional Partners:
GCA_000515395_01517
Unannotated protein.
 
 
 0.994
GCA_000515395_01519
Unannotated protein.
 
  
 0.916
GCA_000515395_01526
Unannotated protein.
 
   0.741
GCA_000515395_01524
Unannotated protein.
  
   0.709
GCA_000515395_01527
Unannotated protein.
  
   0.674
GCA_000515395_01528
Unannotated protein.
  
   0.666
GCA_000515395_01520
Unannotated protein.
       0.656
GCA_000515395_01529
Unannotated protein.
  
   0.655
GCA_000515395_01530
Unannotated protein.
  
   0.648
GCA_000515395_01516
Unannotated protein.
 
  
 0.632
Your Current Organism:
Jiangella gansuensis
NCBI taxonomy Id: 987045
Other names: J. gansuensis DSM 44835, Jiangella gansuensis DSM 44835, Jiangella gansuensis YIM 002, Jiangella gansuensis str. DSM 44835, Jiangella gansuensis strain DSM 44835
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.