STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515395_04329Unannotated protein. (184 aa)    
Predicted Functional Partners:
GCA_000515395_04330
Unannotated protein.
       0.701
GCA_000515395_04328
Unannotated protein.
 
     0.614
GCA_000515395_04331
Unannotated protein.
       0.607
GCA_000515395_01369
Unannotated protein.
  
     0.527
GCA_000515395_01457
Unannotated protein.
  
     0.428
GCA_000515395_04184
Unannotated protein.
 
 
  0.418
GCA_000515395_00226
Unannotated protein.
  
     0.416
GCA_000515395_01084
Unannotated protein.
  
     0.413
Your Current Organism:
Jiangella gansuensis
NCBI taxonomy Id: 987045
Other names: J. gansuensis DSM 44835, Jiangella gansuensis DSM 44835, Jiangella gansuensis YIM 002, Jiangella gansuensis str. DSM 44835, Jiangella gansuensis strain DSM 44835
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.