STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBXJA2T_12332Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (410 aa)    
Predicted Functional Partners:
RBXJA2T_15173
Unannotated protein; Belongs to the arginase family.
 
 0.969
RBXJA2T_05143
Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
 0.933
proB
Unannotated protein; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
   
 0.932
argA
Unannotated protein; Belongs to the acetyltransferase family. ArgA subfamily.
  
  
 0.890
RBXJA2T_10776
Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
  
 0.867
argH
Unannotated protein.
 
  
 0.866
argJ
Unannotated protein; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
 
  
 0.846
argG
Unannotated protein; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
  
 
 0.843
argC
Unannotated protein; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.
  
  
 0.832
argB
Unannotated protein; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
 
  
 0.822
Your Current Organism:
Rubrivivax benzoatilyticus
NCBI taxonomy Id: 987059
Other names: R. benzoatilyticus JA2 = ATCC BAA-35, Rubrivivax benzoatilyticus ATCC BAA-35, Rubrivivax benzoatilyticus ATCC BAA-35 = JA2, Rubrivivax benzoatilyticus JA2, Rubrivivax benzoatilyticus JA2 = ATCC BAA-35
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