Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PHLCEN_2v13581Uncharacterized protein. (266 aa)    
Predicted Functional Partners:
PHLCEN_2v10784
Uncharacterized protein.
    
 0.872
PHLCEN_2v10846
Uncharacterized protein.
    
 0.867
PHLCEN_2v13156
Uncharacterized protein.
    
 0.865
PHLCEN_2v7284
TFIID_20kDa domain-containing protein.
    
 0.852
PHLCEN_2v13277
TAF6_C domain-containing protein.
    
 0.851
PHLCEN_2v11305
SCA7 domain-containing protein.
    
 0.850
PHLCEN_2v544
Uncharacterized protein.
    
 0.849
PHLCEN_2v11316
Uncharacterized protein.
    
 0.847
PHLCEN_2v9530
SGF29 C-terminal domain-containing protein.
    
 0.847
PHLCEN_2v10697
FAT domain-containing protein; Belongs to the PI3/PI4-kinase family.
   
 0.831
Your Current Organism:
Phlebia centrifuga
NCBI taxonomy Id: 98765
Other names: P. centrifuga
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