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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHLCEN_2v9333WD_REPEATS_REGION domain-containing protein. (1133 aa)    
Predicted Functional Partners:
PHLCEN_2v2245
Uncharacterized protein.
    
 0.886
PHLCEN_2v2057
B30.2/SPRY domain-containing protein.
    
 0.882
PHLCEN_2v6263
Uncharacterized protein.
    
 0.880
PHLCEN_2v12957
TPR_REGION domain-containing protein.
    
 0.801
EW026_g5039
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.784
PHLCEN_2v9992
Tubulin domain-containing protein; Belongs to the tubulin family.
    
 0.773
PHLCEN_2v6421
Uncharacterized protein.
    
 0.773
PHLCEN_2v10038
Uncharacterized protein.
    
  0.739
EW026_g3316
Histone H3; Belongs to the histone H3 family.
    
 0.728
PHLCEN_2v5716
UBA domain-containing protein.
    
 0.728
Your Current Organism:
Phlebia centrifuga
NCBI taxonomy Id: 98765
Other names: P. centrifuga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.