STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHLCEN_2v4599Uncharacterized protein. (122 aa)    
Predicted Functional Partners:
PHLCEN_2v794
Uncharacterized protein.
    
 0.969
PHLCEN_2v3599
Ku domain-containing protein.
    
 0.890
PHLCEN_2v11333
DNA ligase.
    
 0.832
PHLCEN_2v1927
Ku_N domain-containing protein.
    
 0.778
PHLCEN_2v13082
Serine/threonine-protein kinase TOR.
    
 0.700
PHLCEN_2v1119
HRDC domain-containing protein.
    
 0.700
PHLCEN_2v10392
DNA_LIGASE_A3 domain-containing protein.
    
 0.694
PHLCEN_2v9693
DNA_ligase_A_N domain-containing protein.
    
 0.694
PHLCEN_2v467
DNA ligase.
    
 0.694
PHLCEN_2v12065
Protein kinase domain-containing protein.
    
 0.601
Your Current Organism:
Phlebia centrifuga
NCBI taxonomy Id: 98765
Other names: P. centrifuga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.