Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ffh | ftsZ | BTSPAZIEG_0267 | BTSPAZIEG_0146 | Signal recognition particle protein. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.563 |
| ffh | metG | BTSPAZIEG_0267 | BTSPAZIEG_0077 | Signal recognition particle protein. | Methionine--tRNA ligase; Shortened 3'-end; By generating mutants with shortened 3'-ends of the E.coli's metG gene, it was established that the first 547 residues was the shortest size able to maintain the polypeptide as a functional and stable structure; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.823 |
| ffh | minC | BTSPAZIEG_0267 | BTSPAZIEG_0217 | Signal recognition particle protein. | Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.468 |
| ffh | pheT | BTSPAZIEG_0267 | BTSPAZIEG_0090 | Signal recognition particle protein. | Phenylalanine--tRNA ligase beta subunit. | 0.781 |
| ftsZ | ffh | BTSPAZIEG_0146 | BTSPAZIEG_0267 | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | Signal recognition particle protein. | 0.563 |
| ftsZ | metG | BTSPAZIEG_0146 | BTSPAZIEG_0077 | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | Methionine--tRNA ligase; Shortened 3'-end; By generating mutants with shortened 3'-ends of the E.coli's metG gene, it was established that the first 547 residues was the shortest size able to maintain the polypeptide as a functional and stable structure; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.633 |
| ftsZ | minC | BTSPAZIEG_0146 | BTSPAZIEG_0217 | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.955 |
| ftsZ | pheT | BTSPAZIEG_0146 | BTSPAZIEG_0090 | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | Phenylalanine--tRNA ligase beta subunit. | 0.761 |
| glyS | minC | BTSPAZIEG_0093 | BTSPAZIEG_0217 | Glycine--tRNA ligase beta subunit. | Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.432 |
| glyS | pheT | BTSPAZIEG_0093 | BTSPAZIEG_0090 | Glycine--tRNA ligase beta subunit. | Phenylalanine--tRNA ligase beta subunit. | 0.633 |
| metG | ffh | BTSPAZIEG_0077 | BTSPAZIEG_0267 | Methionine--tRNA ligase; Shortened 3'-end; By generating mutants with shortened 3'-ends of the E.coli's metG gene, it was established that the first 547 residues was the shortest size able to maintain the polypeptide as a functional and stable structure; Belongs to the class-I aminoacyl-tRNA synthetase family. | Signal recognition particle protein. | 0.823 |
| metG | ftsZ | BTSPAZIEG_0077 | BTSPAZIEG_0146 | Methionine--tRNA ligase; Shortened 3'-end; By generating mutants with shortened 3'-ends of the E.coli's metG gene, it was established that the first 547 residues was the shortest size able to maintain the polypeptide as a functional and stable structure; Belongs to the class-I aminoacyl-tRNA synthetase family. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.633 |
| metG | minC | BTSPAZIEG_0077 | BTSPAZIEG_0217 | Methionine--tRNA ligase; Shortened 3'-end; By generating mutants with shortened 3'-ends of the E.coli's metG gene, it was established that the first 547 residues was the shortest size able to maintain the polypeptide as a functional and stable structure; Belongs to the class-I aminoacyl-tRNA synthetase family. | Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.595 |
| metG | minD | BTSPAZIEG_0077 | BTSPAZIEG_0216 | Methionine--tRNA ligase; Shortened 3'-end; By generating mutants with shortened 3'-ends of the E.coli's metG gene, it was established that the first 547 residues was the shortest size able to maintain the polypeptide as a functional and stable structure; Belongs to the class-I aminoacyl-tRNA synthetase family. | Septum site-determining protein MinD. | 0.593 |
| metG | minE | BTSPAZIEG_0077 | BTSPAZIEG_0215 | Methionine--tRNA ligase; Shortened 3'-end; By generating mutants with shortened 3'-ends of the E.coli's metG gene, it was established that the first 547 residues was the shortest size able to maintain the polypeptide as a functional and stable structure; Belongs to the class-I aminoacyl-tRNA synthetase family. | Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. | 0.602 |
| metG | pheT | BTSPAZIEG_0077 | BTSPAZIEG_0090 | Methionine--tRNA ligase; Shortened 3'-end; By generating mutants with shortened 3'-ends of the E.coli's metG gene, it was established that the first 547 residues was the shortest size able to maintain the polypeptide as a functional and stable structure; Belongs to the class-I aminoacyl-tRNA synthetase family. | Phenylalanine--tRNA ligase beta subunit. | 0.999 |
| minC | ffh | BTSPAZIEG_0217 | BTSPAZIEG_0267 | Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | Signal recognition particle protein. | 0.468 |
| minC | ftsZ | BTSPAZIEG_0217 | BTSPAZIEG_0146 | Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.955 |
| minC | glyS | BTSPAZIEG_0217 | BTSPAZIEG_0093 | Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | Glycine--tRNA ligase beta subunit. | 0.432 |
| minC | metG | BTSPAZIEG_0217 | BTSPAZIEG_0077 | Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | Methionine--tRNA ligase; Shortened 3'-end; By generating mutants with shortened 3'-ends of the E.coli's metG gene, it was established that the first 547 residues was the shortest size able to maintain the polypeptide as a functional and stable structure; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.595 |
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