STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO95234.1Oligopeptide/dipeptide ABC transporter, ATP-binding protein; TC 3.A.1.5.1; Belongs to the ABC transporter superfamily. (345 aa)    
Predicted Functional Partners:
AKO95238.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component; TC 3.A.1.5.2.
 
 0.997
AKO95426.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component; TC 3.A.1.5.2.
 
 0.988
AKO97040.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 0.987
AKO97558.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 0.987
AKO96979.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 0.980
AKO95934.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 0.975
AKO95237.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component; TC 3.A.1.5.2.
 0.974
AKO98578.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 0.941
AKO95425.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 0.889
AKO95233.1
ABC-type dipeptide transport system, periplasmic component; TC 3.A.1.5.2.
 
 
 0.887
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.