STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO95387.1Rod shape-determining protein MreC. (306 aa)    
Predicted Functional Partners:
AKO95388.1
Rod shape-determining protein MreB/Mrl family.
 
 
 0.990
mrdB
Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
  
 0.986
AKO95385.1
Penicillin-binding protein 2.
 
 
 0.985
AKO95383.1
And related dehydrogenases.
 
     0.888
AKO95386.1
Rod shape-determining protein MreD.
 
     0.883
AKO98125.1
Hypothetical protein.
  
 
 0.836
AKO98322.1
DNA repair protein radc; Belongs to the UPF0758 family.
  
  
 0.824
AKO96723.1
Hypothetical protein.
 
 
 
 0.754
AKO97993.1
Hypothetical protein.
 
     0.749
AKO96250.1
Cell division protein FtsI/penicillin-binding protein 2.
 
 
 0.704
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.