STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO95420.1Putative ornithine cyclodeaminase, mu-crystallin-like protein. (315 aa)    
Predicted Functional Partners:
AKO98055.1
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase.
    
  0.902
AKO98294.1
Alanine dehydrogenase; Belongs to the AlaDH/PNT family.
    
  0.901
AKO97475.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
     
 0.813
AKO95419.1
Amidase, hydantoinase/carbamoylase family.
       0.774
AKO95416.1
Hypothetical protein; Contains double-stranded beta-helix domain.
       0.672
AKO95415.1
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family.
       0.671
AKO95417.1
TRAP-type C4-dicarboxylate transport system, small permease component.
       0.671
AKO95418.1
TRAP transporter, DctM subunit.
       0.671
AKO96805.1
Arginase; Belongs to the arginase family.
 
 
 0.652
AKO98048.1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
  
 0.461
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.