STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO95469.1Hypothetical protein; DUF1469. (132 aa)    
Predicted Functional Partners:
AKO95470.1
Hypothetical protein; DUF3618.
 
     0.968
AKO95468.1
Hypothetical protein.
 
     0.967
AKO95471.1
Putative membrane protein.
 
     0.937
AKO98099.1
PRC-barrel domain protein.
  
     0.541
AKO95456.1
Signal transduction histidine kinase.
  
     0.536
AKO95674.1
Protein required for attachment to host cell.
 
     0.484
AKO95467.1
Hypothetical protein.
       0.480
AKO95466.1
Putative stress protein (general stress protein 26).
 
     0.477
AKO96753.1
Heme/copper-type cytochrome/quinol oxidase, subunit 2.
  
     0.423
AKO95472.1
PRC-barrel domain protein.
  
     0.416
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.