STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO95471.1Putative membrane protein. (322 aa)    
Predicted Functional Partners:
AKO95469.1
Hypothetical protein; DUF1469.
 
     0.937
AKO95470.1
Hypothetical protein; DUF3618.
 
    0.929
AKO95468.1
Hypothetical protein.
 
     0.921
AKO95466.1
Putative stress protein (general stress protein 26).
 
    0.674
AKO95465.1
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
    0.540
AKO97115.1
Hypothetical protein.
   
    0.483
AKO95467.1
Hypothetical protein.
       0.480
AKO96058.1
PAS domain protein S-box.
 
     0.468
AKO98099.1
PRC-barrel domain protein.
 
     0.446
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.421
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.