STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO95599.1Flagellar motor protein MotB. (880 aa)    
Predicted Functional Partners:
AKO98756.1
Flagellar motor stator protein MotA.
  
 0.990
AKO95598.1
MotA/TolQ/ExbB proton channel family protein, probably associated with flagella.
 
     0.949
AKO98744.1
Flagellar motor protein MotB.
     
 0.909
AKO98769.1
Flagellar basal-body rod protein FlgC; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.895
AKO96522.1
Flagellar motor switch protein FliG.
 
  
 0.841
AKO98758.1
Flagellar biosynthesis pathway, component FlhA.
 
  
 0.824
AKO98746.1
Flagellar hook-associated protein FlgK.
 
  
 0.818
AKO98771.1
Flagellum-specific ATP synthase FliI.
 
  
 0.810
AKO98760.1
Flagellar biosynthesis pathway, component FlhB.
 
  
 0.795
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.782
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.