STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO95610.1ABC-type uncharacterized transport system, ATPase component. (534 aa)    
Predicted Functional Partners:
AKO95609.1
ABC-type uncharacterized transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.992
AKO95608.1
Putative ABC-type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.990
AKO95611.1
Putative ABC-type transport system, periplasmic component/surface lipoprotein.
 
 0.989
AKO98540.1
ABC-type uncharacterized transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.988
AKO98541.1
Putative ABC-type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.981
AKO98542.1
Putative ABC-type transport system, periplasmic component/surface lipoprotein.
 
 
 0.958
AKO98539.1
ABC-type uncharacterized transport system, ATPase component.
  
  
 
0.912
AKO95951.1
Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component.
 
  
  0.713
AKO95449.1
Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component.
 
  
  0.627
AKO95949.1
Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component; TC 3.A.1.2.1; Belongs to the binding-protein-dependent transport system permease family.
 
  
  0.475
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.