STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO95628.1Arabinose efflux permease. (402 aa)    
Predicted Functional Partners:
AKO98643.1
Hypothetical protein; DUF2853.
  
     0.583
AKO95629.1
RHS repeat protein-associated core domain protein.
       0.486
AKO95625.1
Paraquat-inducible protein B.
  
    0.457
AKO95630.1
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin.
       0.433
AKO95624.1
Hypothetical protein.
       0.429
AKO95626.1
Putative paraquat-inducible protein A; Overlaps another CDS with the same product name.
       0.429
AKO95627.1
Putative paraquat-inducible protein A; Overlaps another CDS with the same product name.
       0.429
AKO98490.1
Non-ribosomal peptide synthase.
  
  
 0.418
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.