STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO95629.1RHS repeat protein-associated core domain protein. (2735 aa)    
Predicted Functional Partners:
AKO97976.1
Zn-dependent hydrolase; Including glyoxylases.
   
    0.778
smc
Chromosome partition ATPase SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
 
 0.682
AKO95630.1
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin.
       0.678
AKO95633.1
Hypothetical protein.
  
  
 0.643
AKO95631.1
Hypothetical protein.
       0.610
AKO95632.1
Hypothetical protein.
       0.610
AKO96220.1
Hypothetical protein; Belongs to the UPF0276 family.
  
    0.568
AKO95634.1
Hypothetical protein.
       0.563
AKO96219.1
Hypothetical protein; DUF2063.
   
    0.512
AKO95628.1
Arabinose efflux permease.
       0.486
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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