STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO95728.1Flp pilus assembly protein TadC. (322 aa)    
Predicted Functional Partners:
AKO95729.1
Flp pilus assembly protein TadB.
 
  
0.999
AKO97672.1
Hypothetical protein.
 
    0.999
AKO95730.1
Flp pilus assembly protein, ATPase CpaF.
 
  
 0.989
AKO95731.1
Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly.
 
  
 0.989
AKO95734.1
Flp pilus assembly protein CpaB.
 
  
 0.976
AKO95733.1
Flp pilus assembly protein, secretin CpaC; Belongs to the bacterial secretin family.
 
  
 0.959
AKO95724.1
Putative ATPase with chaperone activity, associated with Flp pilus assembly.
 
    0.939
AKO95726.1
Flp pilus assembly protein TadD.
 
  
 0.913
AKO95727.1
Flp pilus assembly protein TadD.
 
  
 0.885
AKO98773.1
Flagellar biosynthesis regulator FlbT.
   
    0.853
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.