STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO95736.1Flp pilus assembly protein, pilin Flp. (59 aa)    
Predicted Functional Partners:
AKO95734.1
Flp pilus assembly protein CpaB.
 
  
 0.898
AKO95731.1
Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly.
 
  
 0.856
AKO95725.1
Flp pilus assembly protein, protease CpaA.
 
  
 0.844
AKO97666.1
Hypothetical protein.
 
  
 0.820
AKO97667.1
TadE-like protein.
 
  
 0.804
AKO97671.1
Hypothetical protein.
 
  
 0.804
AKO97672.1
Hypothetical protein.
 
  
 0.804
AKO95727.1
Flp pilus assembly protein TadD.
 
  
 0.772
AKO95726.1
Flp pilus assembly protein TadD.
 
  
 0.741
AKO97021.1
Tellurite resistance protein TrgA.
  
     0.711
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.