STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO95868.1Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (318 aa)    
Predicted Functional Partners:
AKO96475.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.577
AKO96348.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.523
AKO97384.1
Putative pyridoxal phosphate-dependent enzyme; Apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
  
     0.520
AKO97466.1
Hypothetical protein.
  
     0.512
AKO98108.1
Hypothetical protein; DUF3118.
  
     0.512
AKO98600.1
Putative transcriptional regulator.
 
  
 0.500
AKO95867.1
Hypothetical protein.
       0.489
AKO97840.1
Antibiotic biosynthesis monooxygenase.
  
     0.489
AKO96888.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.482
AKO97470.1
Hypothetical protein.
  
     0.465
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.