STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO95912.1Prepilin signal peptidase PulO; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (241 aa)    
Predicted Functional Partners:
AKO95914.1
General secretion pathway protein G.
 
  
 0.961
AKO95926.1
Type II secretory pathway, component PulF.
 
  
 0.919
AKO95925.1
Type II secretory pathway, ATPase PulE.
 
 
 0.916
AKO95918.1
Type II secretory pathway, component PulK.
 
   
 0.858
AKO95924.1
Type II secretory pathway, component PulD.
 
   
 0.844
AKO95913.1
Rhomboid family GlyGly-CTERM serine protease.
     
 0.787
AKO95746.1
DNA protecting protein DprA.
  
  
 0.762
AKO95917.1
Type II secretion system protein OutJ.
  
  
 0.691
AKO95915.1
Prepilin-type N-terminal cleavage/methylation domain protein.
     
 0.675
AKO95916.1
General secretion pathway protein I.
     
 0.632
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.