STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO95937.1Transcriptional regulator. (223 aa)    
Predicted Functional Partners:
AKO95927.1
Transcriptional regulator.
 
    0.804
AKO96429.1
Transcriptional regulator.
  
     0.775
AKO97324.1
Transcriptional regulator.
  
     0.770
AKO97765.1
Transcriptional regulator.
  
    0.758
AKO96368.1
Transcriptional regulator.
  
     0.748
AKO98161.1
Transcriptional regulator.
  
     0.747
AKO96016.1
Transcriptional regulator.
  
    0.723
AKO95274.1
Transcriptional regulator.
  
    0.686
AKO95934.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
     0.607
AKO95933.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component; TC 3.A.1.5.1.
       0.554
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.