STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO95950.1ABC-type sugar transport system, periplasmic component; TC 3.A.1.2.-. (343 aa)    
Predicted Functional Partners:
AKO95949.1
Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component; TC 3.A.1.2.1; Belongs to the binding-protein-dependent transport system permease family.
 
 0.966
AKO95951.1
Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component.
 
 0.963
AKO95952.1
ABC-type sugar transport system, ATPase component.
 
 0.960
AKO95449.1
Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component.
 
 0.882
AKO97831.1
Signal transduction histidine kinase.
  
 
 0.879
AKO98178.1
Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component.
 
 0.842
AKO95945.1
Maltose-binding protein periplasmic protein/domain protein.
 
 
 0.837
AKO96318.1
Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component.
 
 0.827
AKO95932.1
Bacterial extracellular solute-binding protein, family 5 Middle; TC 3.A.1.5.1.
  
  
 0.815
AKO97442.1
Signal transduction histidine kinase.
   
 
 0.794
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.