STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO95992.1Hypothetical protein. (131 aa)    
Predicted Functional Partners:
AKO96719.1
Hypothetical protein.
  
     0.722
AKO97501.1
Hypothetical protein.
  
     0.707
AKO97466.1
Hypothetical protein.
  
     0.653
AKO97468.1
Domain protein of unknown function.
  
     0.616
AKO97469.1
Methyltransferase, FkbM family.
  
     0.543
AKO97142.1
Hypothetical protein.
  
     0.536
AKO95991.1
Transcriptional regulator.
       0.524
AKO95821.1
Hypothetical protein.
  
     0.478
smc
Chromosome partition ATPase SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
       0.473
AKO97209.1
Hypothetical protein.
  
     0.463
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.