STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO96226.1Fatty acid desaturase. (342 aa)    
Predicted Functional Partners:
AKO95335.1
Citrate lyase synthetase.
  
  
 
0.919
AKO96322.1
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.903
AKO95591.1
NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
  0.900
AKO98574.1
NAD-dependent aldehyde dehydrogenase.
     
  0.900
AKO98596.1
NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
  0.900
AKO96647.1
Hypothetical protein.
  
   
 0.741
AKO96225.1
Hypothetical protein.
       0.704
AKO98401.1
NADH:flavin oxidoreductase, Old Yellow Enzyme family.
 
   
 0.686
AKO97595.1
Capsule polysaccharide export protein.
  
     0.632
AKO98332.1
Hypothetical protein.
  
     0.614
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.