STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO96246.1Outer membrane cobalamin receptor protein. (631 aa)    
Predicted Functional Partners:
AKO96245.1
ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
  
 0.974
AKO96243.1
ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component.
 
   
 0.952
AKO96244.1
ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.932
AKO98267.1
Hypothetical protein.
    
 0.829
AKO95439.1
Ferric siderophore transport, periplasmic binding protein TonB.
 
 
 
 0.786
AKO98064.1
Type I secretion outer membrane protein, TolC family.
  
  
 0.742
AKO95711.1
Hypothetical protein; Cell division and transport-associated protein TolA (TC 2.C.1.2.1).
   
 
 0.701
lptD
Organic solvent tolerance protein OstA; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
     
 0.671
AKO95442.1
Ferric siderophore transport system protein.
 
   
 0.660
AKO97596.1
Periplasmic protein involved in polysaccharide export.
     
 0.646
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.