STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO96380.1Putative redox protein, regulator of disulfide bond formation. (151 aa)    
Predicted Functional Partners:
AKO96381.1
TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
     0.885
AKO96379.1
Nitroreductase.
 
     0.860
AKO96382.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
    0.841
AKO96377.1
Hypothetical protein.
 
     0.802
AKO96378.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
  
    0.777
AKO96383.1
TRAP transporter, DctM subunit.
 
     0.732
AKO96384.1
Protocatechuate 3,4-dioxygenase beta subunit.
 
     0.681
AKO96525.1
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase).
  
     0.493
AKO97407.1
Hypothetical protein.
 
     0.475
AKO97960.1
Hypothetical protein.
  
     0.442
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.