STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO96471.1Ribulose kinase. (118 aa)    
Predicted Functional Partners:
AKO96472.1
Erythritol kinase.
 
  
 0.874
AKO96474.1
Ribulose-5-phosphate 4-epimerase; And related epimerases and aldolases.
  
  
 0.858
AKO96473.1
And related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.773
AKO96470.1
And related enzymes.
       0.682
AKO96469.1
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component.
  
    0.620
AKO96468.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
  
    0.548
AKO96712.1
Ribulose-5-phosphate 4-epimerase; And related epimerases and aldolases.
 
  
 0.516
AKO96466.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
       0.455
AKO96467.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
       0.455
AKO98449.1
Ribulose-5-phosphate 4-epimerase; And related epimerases and aldolases.
  
  
 0.428
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.