STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO96476.1Tricarboxylate transport protein TctC. (313 aa)    
Predicted Functional Partners:
AKO96478.1
Hypothetical protein.
 
  
 0.945
AKO98218.1
Tricarboxylate transport membrane protein TctA.
 
  
 0.808
AKO96155.1
Hypothetical protein.
 
  
 0.773
AKO96426.1
Hypothetical protein.
 
  
 0.771
AKO96015.1
Hypothetical protein.
 
  
 0.765
AKO96479.1
And related enzymes.
 
     0.762
AKO96106.1
Hypothetical protein.
 
  
 0.759
AKO96428.1
Hypothetical protein.
  
     0.743
AKO96013.1
Hypothetical protein.
  
     0.679
AKO96477.1
Tripartite tricarboxylate transporter TctB family.
       0.675
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.