STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO96493.1Sarcosine oxidase gamma subunit. (192 aa)    
Predicted Functional Partners:
AKO96491.1
Sarcosine oxidase delta subunit.
 
 0.999
AKO96492.1
Sarcosine oxidase, alpha subunit family, heterotetrameric form; Belongs to the GcvT family.
 
 0.999
AKO95389.1
Sarcosine dehydrogenase (aminomethyltransferase); Belongs to the GcvT family.
 
 0.981
AKO96488.1
Sarcosine oxidase, beta subunit family, heterotetrameric form.
 
 0.980
AKO97235.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
  
 0.971
AKO98026.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
  
 0.971
AKO98452.1
Xaa-Pro aminopeptidase.
  
  
  0.915
AKO96124.1
Sarcosine oxidase, alpha subunit family, heterotetrameric form; Belongs to the GcvT family.
 
 
 0.914
glyA
Glycine/serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 
 0.910
AKO97887.1
Glycine/serine hydroxymethyltransferase.
  
 
 0.910
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.