STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO96496.1LysM domain protein. (726 aa)    
Predicted Functional Partners:
AKO98636.1
Hypothetical protein.
  
    0.676
AKO96495.1
Lysine decarboxylase; TIGR00730; Belongs to the LOG family.
       0.659
AKO97426.1
Translation initiation factor 2 (IF-2, GTPase).
 
 
   0.618
AKO95598.1
MotA/TolQ/ExbB proton channel family protein, probably associated with flagella.
  
     0.591
AKO95925.1
Type II secretory pathway, ATPase PulE.
    
   0.543
AKO95926.1
Type II secretory pathway, component PulF.
    
   0.543
AKO95391.1
Outer membrane protein; And related peptidoglycan-associated (lipo)proteins.
 
    0.523
AKO97538.1
Multimeric flavodoxin WrbA.
   
  
 0.509
AKO97822.1
NAD(P)H:quinone oxidoreductase, type IV.
   
  
 0.509
AKO97847.1
Tellurite resistance protein TerB.
  
     0.502
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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