STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO96550.1Hypothetical protein. (290 aa)    
Predicted Functional Partners:
metAA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
 
     0.826
AKO96548.1
Putative hydrolase or acyltransferase (alpha/beta hydrolase superfamily).
  
  0.781
AKO96551.1
Long-chain fatty acid transport protein.
       0.699
AKO98490.1
Non-ribosomal peptide synthase.
  
 0.669
AKO97476.1
ABC transporter permease protein.
  
 0.617
AKO98062.1
Hypothetical protein.
  
     0.601
AKO96546.1
Transcriptional regulator.
     
 0.569
AKO96547.1
Polyphosphate kinase 2 family; PA0141.
       0.565
AKO97875.1
RecD-like DNA helicase.
  
     0.565
AKO97794.1
Hypothetical protein.
  
     0.553
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.